upgma method Search Results


upgma method  (Ridom GmbH)
90
Ridom GmbH upgma method
<t>.</t> <t>Circular</t> representation of the phylogenetic tree obtained using <t>UPGMA</t> method ( http://spa.ridom.de/ ). The spa types were clustered into CCs (ie, spa CCs) by use of the integrated BURP (Based Upon Repeat Patterns) algorithm. User-definable parameters were set as follows: “cluster spa types into spa CC if cost distances are less than or equal to 4” and “exclude spa types shorter than 5 repeats.” This parameter combination ensures optimal concordance (95.3%) between BURP and e- BURST ( http://spa.ridom.de/ ). Only major spa CC are represented.
Upgma Method, supplied by Ridom GmbH, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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upgma method - by Bioz Stars, 2026-10
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upgma method  (GENETYX CORPORATION)
90
GENETYX CORPORATION upgma method
<t>.</t> <t>Circular</t> representation of the phylogenetic tree obtained using <t>UPGMA</t> method ( http://spa.ridom.de/ ). The spa types were clustered into CCs (ie, spa CCs) by use of the integrated BURP (Based Upon Repeat Patterns) algorithm. User-definable parameters were set as follows: “cluster spa types into spa CC if cost distances are less than or equal to 4” and “exclude spa types shorter than 5 repeats.” This parameter combination ensures optimal concordance (95.3%) between BURP and e- BURST ( http://spa.ridom.de/ ). Only major spa CC are represented.
Upgma Method, supplied by GENETYX CORPORATION, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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upgma method - by Bioz Stars, 2026-10
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unweighted pair method using arithmetic average algorithm (upgma)  (Vilber Lourmat)
90
Vilber Lourmat unweighted pair method using arithmetic average algorithm (upgma)
<t>.</t> <t>Circular</t> representation of the phylogenetic tree obtained using <t>UPGMA</t> method ( http://spa.ridom.de/ ). The spa types were clustered into CCs (ie, spa CCs) by use of the integrated BURP (Based Upon Repeat Patterns) algorithm. User-definable parameters were set as follows: “cluster spa types into spa CC if cost distances are less than or equal to 4” and “exclude spa types shorter than 5 repeats.” This parameter combination ensures optimal concordance (95.3%) between BURP and e- BURST ( http://spa.ridom.de/ ). Only major spa CC are represented.
Unweighted Pair Method Using Arithmetic Average Algorithm (Upgma), supplied by Vilber Lourmat, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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unweighted pair method using arithmetic average algorithm (upgma) - by Bioz Stars, 2026-10
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unweighted pair method with arithmetic mean (upgma) tree  (ChunLab Inc)
90
ChunLab Inc unweighted pair method with arithmetic mean (upgma) tree
<t>.</t> <t>Circular</t> representation of the phylogenetic tree obtained using <t>UPGMA</t> method ( http://spa.ridom.de/ ). The spa types were clustered into CCs (ie, spa CCs) by use of the integrated BURP (Based Upon Repeat Patterns) algorithm. User-definable parameters were set as follows: “cluster spa types into spa CC if cost distances are less than or equal to 4” and “exclude spa types shorter than 5 repeats.” This parameter combination ensures optimal concordance (95.3%) between BURP and e- BURST ( http://spa.ridom.de/ ). Only major spa CC are represented.
Unweighted Pair Method With Arithmetic Mean (Upgma) Tree, supplied by ChunLab Inc, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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unweighted pair method with arithmetic mean (upgma) tree - by Bioz Stars, 2026-10
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upgma (unweighted paircluster method using arithmetic averages) analysis  (Applied Biostatistics Inc)
90
Applied Biostatistics Inc upgma (unweighted paircluster method using arithmetic averages) analysis
<t>.</t> <t>Circular</t> representation of the phylogenetic tree obtained using <t>UPGMA</t> method ( http://spa.ridom.de/ ). The spa types were clustered into CCs (ie, spa CCs) by use of the integrated BURP (Based Upon Repeat Patterns) algorithm. User-definable parameters were set as follows: “cluster spa types into spa CC if cost distances are less than or equal to 4” and “exclude spa types shorter than 5 repeats.” This parameter combination ensures optimal concordance (95.3%) between BURP and e- BURST ( http://spa.ridom.de/ ). Only major spa CC are represented.
Upgma (Unweighted Paircluster Method Using Arithmetic Averages) Analysis, supplied by Applied Biostatistics Inc, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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unweighted pair method with arithmetic mean (upgma) dendrogram cluster analysis  (Addinsoft inc)
90
Addinsoft inc unweighted pair method with arithmetic mean (upgma) dendrogram cluster analysis
<t>.</t> <t>Circular</t> representation of the phylogenetic tree obtained using <t>UPGMA</t> method ( http://spa.ridom.de/ ). The spa types were clustered into CCs (ie, spa CCs) by use of the integrated BURP (Based Upon Repeat Patterns) algorithm. User-definable parameters were set as follows: “cluster spa types into spa CC if cost distances are less than or equal to 4” and “exclude spa types shorter than 5 repeats.” This parameter combination ensures optimal concordance (95.3%) between BURP and e- BURST ( http://spa.ridom.de/ ). Only major spa CC are represented.
Unweighted Pair Method With Arithmetic Mean (Upgma) Dendrogram Cluster Analysis, supplied by Addinsoft inc, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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Average 90 stars, based on 1 article reviews
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unweighted pair-group method with arithmetic mean (upgma) tree  (ChunLab Inc)
90
ChunLab Inc unweighted pair-group method with arithmetic mean (upgma) tree
<t>.</t> <t>Circular</t> representation of the phylogenetic tree obtained using <t>UPGMA</t> method ( http://spa.ridom.de/ ). The spa types were clustered into CCs (ie, spa CCs) by use of the integrated BURP (Based Upon Repeat Patterns) algorithm. User-definable parameters were set as follows: “cluster spa types into spa CC if cost distances are less than or equal to 4” and “exclude spa types shorter than 5 repeats.” This parameter combination ensures optimal concordance (95.3%) between BURP and e- BURST ( http://spa.ridom.de/ ). Only major spa CC are represented.
Unweighted Pair Group Method With Arithmetic Mean (Upgma) Tree, supplied by ChunLab Inc, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/product/upgma+method/unweighted+pair+group+method+with+arithmetic+mean++upgma++tree/pmc09873319-102-3-14
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un-weighted pair-group method with an arithmetic average (upgma) using the ntsys pc version 2.11  (Applied Biostatistics Inc)
90
Applied Biostatistics Inc un-weighted pair-group method with an arithmetic average (upgma) using the ntsys pc version 2.11
<t>.</t> <t>Circular</t> representation of the phylogenetic tree obtained using <t>UPGMA</t> method ( http://spa.ridom.de/ ). The spa types were clustered into CCs (ie, spa CCs) by use of the integrated BURP (Based Upon Repeat Patterns) algorithm. User-definable parameters were set as follows: “cluster spa types into spa CC if cost distances are less than or equal to 4” and “exclude spa types shorter than 5 repeats.” This parameter combination ensures optimal concordance (95.3%) between BURP and e- BURST ( http://spa.ridom.de/ ). Only major spa CC are represented.
Un Weighted Pair Group Method With An Arithmetic Average (Upgma) Using The Ntsys Pc Version 2.11, supplied by Applied Biostatistics Inc, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/product/upgma+method/un+weighted+pair+group+method+with+an+arithmetic+average++upgma++using+the+ntsys+pc+version+2+11/pmc05313404-166-5-19
Average 90 stars, based on 1 article reviews
un-weighted pair-group method with an arithmetic average (upgma) using the ntsys pc version 2.11 - by Bioz Stars, 2026-10
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sequence alignment unweighted pair-group method arithmetic (upgma) analysis  (CLC Bio)
90
CLC Bio sequence alignment unweighted pair-group method arithmetic (upgma) analysis
<t>.</t> <t>Circular</t> representation of the phylogenetic tree obtained using <t>UPGMA</t> method ( http://spa.ridom.de/ ). The spa types were clustered into CCs (ie, spa CCs) by use of the integrated BURP (Based Upon Repeat Patterns) algorithm. User-definable parameters were set as follows: “cluster spa types into spa CC if cost distances are less than or equal to 4” and “exclude spa types shorter than 5 repeats.” This parameter combination ensures optimal concordance (95.3%) between BURP and e- BURST ( http://spa.ridom.de/ ). Only major spa CC are represented.
Sequence Alignment Unweighted Pair Group Method Arithmetic (Upgma) Analysis, supplied by CLC Bio, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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unweighted pairgroup method using arithmetic averages (upgma) clustering strategy  (Applied Biostatistics Inc)
90
Applied Biostatistics Inc unweighted pairgroup method using arithmetic averages (upgma) clustering strategy
<t>.</t> <t>Circular</t> representation of the phylogenetic tree obtained using <t>UPGMA</t> method ( http://spa.ridom.de/ ). The spa types were clustered into CCs (ie, spa CCs) by use of the integrated BURP (Based Upon Repeat Patterns) algorithm. User-definable parameters were set as follows: “cluster spa types into spa CC if cost distances are less than or equal to 4” and “exclude spa types shorter than 5 repeats.” This parameter combination ensures optimal concordance (95.3%) between BURP and e- BURST ( http://spa.ridom.de/ ). Only major spa CC are represented.
Unweighted Pairgroup Method Using Arithmetic Averages (Upgma) Clustering Strategy, supplied by Applied Biostatistics Inc, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/product/upgma+method/unweighted+pairgroup+method+using+arithmetic+averages++upgma++clustering+strategy/pm29602047-82-6-21
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unweighted pairgroup method using arithmetic averages (upgma) clustering strategy - by Bioz Stars, 2026-10
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unweighted pair method with arithmetic averages (upgma)  (ncss llc)
90
ncss llc unweighted pair method with arithmetic averages (upgma)
<t>.</t> <t>Circular</t> representation of the phylogenetic tree obtained using <t>UPGMA</t> method ( http://spa.ridom.de/ ). The spa types were clustered into CCs (ie, spa CCs) by use of the integrated BURP (Based Upon Repeat Patterns) algorithm. User-definable parameters were set as follows: “cluster spa types into spa CC if cost distances are less than or equal to 4” and “exclude spa types shorter than 5 repeats.” This parameter combination ensures optimal concordance (95.3%) between BURP and e- BURST ( http://spa.ridom.de/ ). Only major spa CC are represented.
Unweighted Pair Method With Arithmetic Averages (Upgma), supplied by ncss llc, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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unweighted pair-group method with arithmetic mean (upgma) method genetyx software version 7.0  (GENETYX CORPORATION)
90
GENETYX CORPORATION unweighted pair-group method with arithmetic mean (upgma) method genetyx software version 7.0
<t>.</t> <t>Circular</t> representation of the phylogenetic tree obtained using <t>UPGMA</t> method ( http://spa.ridom.de/ ). The spa types were clustered into CCs (ie, spa CCs) by use of the integrated BURP (Based Upon Repeat Patterns) algorithm. User-definable parameters were set as follows: “cluster spa types into spa CC if cost distances are less than or equal to 4” and “exclude spa types shorter than 5 repeats.” This parameter combination ensures optimal concordance (95.3%) between BURP and e- BURST ( http://spa.ridom.de/ ). Only major spa CC are represented.
Unweighted Pair Group Method With Arithmetic Mean (Upgma) Method Genetyx Software Version 7.0, supplied by GENETYX CORPORATION, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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unweighted pair-group method with arithmetic mean (upgma) method genetyx software version 7.0 - by Bioz Stars, 2026-10
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Image Search Results


. Circular representation of the phylogenetic tree obtained using UPGMA method ( http://spa.ridom.de/ ). The spa types were clustered into CCs (ie, spa CCs) by use of the integrated BURP (Based Upon Repeat Patterns) algorithm. User-definable parameters were set as follows: “cluster spa types into spa CC if cost distances are less than or equal to 4” and “exclude spa types shorter than 5 repeats.” This parameter combination ensures optimal concordance (95.3%) between BURP and e- BURST ( http://spa.ridom.de/ ). Only major spa CC are represented.

Journal: PLoS ONE

Article Title: Rise of CC398 Lineage of Staphylococcus aureus among Infective Endocarditis Isolates Revealed by Two Consecutive Population-Based Studies in France

doi: 10.1371/journal.pone.0051172

Figure Lengend Snippet: . Circular representation of the phylogenetic tree obtained using UPGMA method ( http://spa.ridom.de/ ). The spa types were clustered into CCs (ie, spa CCs) by use of the integrated BURP (Based Upon Repeat Patterns) algorithm. User-definable parameters were set as follows: “cluster spa types into spa CC if cost distances are less than or equal to 4” and “exclude spa types shorter than 5 repeats.” This parameter combination ensures optimal concordance (95.3%) between BURP and e- BURST ( http://spa.ridom.de/ ). Only major spa CC are represented.

Article Snippet: To infer clonal relatedness, the Based Upon Repeat Pattern (BURP) algorithm was used followed by circular representation of the phylogenetic tree obtained using UPGMA method ( http://spa.ridom.de/ ) .

Techniques: